Add/update all batch activity — activityAll • motus

Download or resume a download of the activityAll table in an existing Motus database. Batch activity refers to the number of hits detected during a given batch. Batches with large numbers of hits may indicate interference and thus unreliable hits.

Usage

activityAll(src, resume = FALSE)

Arguments

src: SQLite connection. Result of tagme(XXX) or DBI::dbConnect(RSQLite::SQLite(), "XXX.motus").
resume: Logical. Resume a download? Otherwise the table is removed and the download is started from the beginning.

Examples

# Download sample project 176 to .motus database (username/password are "motus.sample")
if (FALSE) sql_motus <- tagme(176, new = TRUE)

# Or use example data base in memory
sql_motus <- tagmeSample()
  
# Get all activity
if (FALSE) sql_motus <- activityAll(sql_motus)

# Access 'activityAll' table
library(dplyr)
a <- tbl(sql_motus, "activityAll")
  
# If interrupted and you want to resume
if (FALSE) sql_motus <- activityAll(sql_motus, resume = TRUE)